Pseudomonas putida HB3267, B479_14130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03349 JCVI: DotU/TssL family secretion system protein IPR017732 Type IV / VI secretion system, DotU 19 225 3.0E-61
NCBIfam NF038228 NCBIFAM: type IVB secretion system protein IcmH/DotU - - 30 231 8.0E-22
PANTHER PTHR38033 MEMBRANE PROTEIN-RELATED - - 19 235 1.1E-31
Gene3D G3DSA:1.25.40.590 Type IV / VI secretion system, DotU IPR038522 Type IV / VI secretion system, DotU superfamily 14 181 1.1E-40
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 20 219 1.4E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.