Pseudomonas putida HB3267, B479_16065

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13185
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 601 713 1.0E-36
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 487 550 1.60705E-12
Coils Coil Coil - - 866 886 -
Coils Coil Coil - - 389 483 -
Coils Coil Coil - - 603 623 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 697 710 2.8E-15
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 376 943 0.0
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 673 691 2.8E-15
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1031 1145 2.6E-40
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 762 878 4.98E-26
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 656 666 2.8E-15
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 606 710 6.23815E-49
CDD cd19410 HK9-like_sensor - - 49 171 1.40962E-35
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1029 1150 1.25E-39
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 885 1015 5.83E-18
SUPERFAMILY SSF55781 GAF domain-like - - 242 415 3.53E-20
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 553 714 5.6E-47
Gene3D G3DSA:3.40.50.2300 - - - 883 1019 3.2E-17
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1033 1145 3.8E-29
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 887 969 3.5E-14
Gene3D G3DSA:3.40.50.2300 - - - 765 882 3.8E-24
Pfam PF13185 GAF domain IPR003018 GAF domain 257 388 4.6E-11
Gene3D G3DSA:1.10.287.130 - - - 452 552 2.7E-25
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 46 178 1.5E-38
SMART SM00065 gaf_1 IPR003018 GAF domain 253 397 6.4E-7
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1033 1145 3.36353E-41
CDD cd00156 REC - - 888 979 6.78516E-13
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 553 715 2.9E-48
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 763 873 1.8E-17
MobiDBLite mobidb-lite consensus disorder prediction - - 421 456 -
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 487 554 1.5E-15
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 486 554 6.4E-21
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 885 999 2.3E-7
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 638 652 2.8E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 434 449 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 543 711 1.83E-44
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 222 399 2.8E-18
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 601 711 1.1E-26
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 765 872 1.7E-15
Gene3D G3DSA:3.40.50.2300 - - - 1031 1154 2.9E-44
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 472 555 2.16E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.