Pseudomonas putida HB3267, B479_20655

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00337
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 144 272 2.6E-117
PANTHER PTHR47151 LEU/ILE/VAL-BINDING ABC TRANSPORTER SUBUNIT - - 8 360 2.2E-116
Pfam PF13458 Periplasmic binding protein IPR028081 Leucine-binding protein domain 25 360 9.7E-62
Gene3D G3DSA:3.40.50.2300 - - - 27 347 2.6E-117
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 24 364 2.88E-93
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 277 290 2.2E-48
CDD cd06342 PBP1_ABC_LIVBP-like - - 27 359 0.0
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 254 272 2.2E-48
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 88 98 2.2E-48
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 67 85 2.2E-48
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 329 344 2.2E-48
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 48 64 2.2E-48
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 26 42 2.2E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.