Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006284 | base-excision repair |
Inferred from Sequence Model
Term mapped from: InterPro:cd00056
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006281 | DNA repair |
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00942
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0051539 | 4 iron, 4 sulfur cluster binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00525
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00633
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | ppuh03410 | Base excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SMART | SM00478 | endo3end | IPR003265 | HhH-GPD domain | 38 | 185 | 1.6E-58 |
PIRSF | PIRSF001435 | Nth | - | - | 1 | 212 | 2.9E-54 |
FunFam | G3DSA:1.10.1670.10:FF:000001 | Endonuclease III | - | - | 126 | 205 | 2.5E-34 |
PANTHER | PTHR10359 | A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III | - | - | 2 | 210 | 6.8E-80 |
SMART | SM00525 | ccc3 | IPR003651 | Endonuclease III-like, iron-sulphur cluster loop motif | 186 | 206 | 9.7E-5 |
FunFam | G3DSA:1.10.340.30:FF:000001 | Endonuclease III | - | - | 21 | 132 | 5.0E-42 |
Gene3D | G3DSA:1.10.340.30 | Hypothetical protein; domain 2 | - | - | 21 | 132 | 2.9E-82 |
SUPERFAMILY | SSF48150 | DNA-glycosylase | IPR011257 | DNA glycosylase | 4 | 208 | 1.88E-73 |
Pfam | PF00633 | Helix-hairpin-helix motif | IPR000445 | Helix-hairpin-helix motif | 99 | 127 | 1.0E-8 |
Pfam | PF00730 | HhH-GPD superfamily base excision DNA repair protein | IPR003265 | HhH-GPD domain | 34 | 168 | 4.4E-19 |
Gene3D | G3DSA:1.10.1670.10 | - | IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal | 12 | 205 | 2.9E-82 |
CDD | cd00056 | ENDO3c | IPR003265 | HhH-GPD domain | 30 | 183 | 1.31513E-54 |
Hamap | MF_00942 | Endonuclease III [nth]. | IPR005759 | Endonuclease III | 1 | 209 | 37.721497 |
NCBIfam | TIGR01083 | JCVI: endonuclease III | IPR005759 | Endonuclease III | 5 | 194 | 1.8E-84 |