Pseudomonas syringae pv. syringae B728a, Psyr_0001 (dnaA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006270 DNA replication initiation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06571
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003688 DNA replication origin binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06571
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06571
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006275 regulation of DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06571
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 469 488 6.7E-53
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 208 413 8.4E-7
Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. IPR001957 Chromosomal replication control, initiator DnaA 3 510 34.169533
CDD cd06571 Bac_DnaA_C IPR013159 Chromosomal replication initiator, DnaA C-terminal 420 509 8.56097E-42
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 241 255 6.7E-53
CDD cd00009 AAA - - 191 334 1.35034E-18
Pfam PF08299 Bacterial dnaA protein helix-turn-helix IPR013159 Chromosomal replication initiator, DnaA C-terminal 420 488 1.3E-31
Gene3D G3DSA:1.10.1750.10 - IPR010921 Trp repressor/replication initiator 418 511 9.6E-34
Gene3D G3DSA:3.30.300.180 - IPR038454 DnaA, N-terminal domain superfamily 2 136 2.2E-27
SUPERFAMILY SSF48295 TrpR-like IPR010921 Trp repressor/replication initiator 407 509 8.63E-37
PANTHER PTHR30050 CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA - - 1 500 0.0
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 273 287 6.7E-53
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 307 334 6.7E-53
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 175 341 1.7E-50
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 177 387 3.14E-44
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 209 229 6.7E-53
FunFam G3DSA:1.10.8.60:FF:000003 Chromosomal replication initiator protein DnaA - - 342 412 4.5E-33
SMART SM00760 bac_dnaa_c7seqb IPR013159 Chromosomal replication initiator, DnaA C-terminal 419 488 5.3E-44
FunFam G3DSA:3.40.50.300:FF:000103 Chromosomal replication initiator protein DnaA - - 174 341 3.4E-101
MobiDBLite mobidb-lite consensus disorder prediction - - 146 160 -
NCBIfam TIGR00362 JCVI: chromosomal replication initiator protein DnaA IPR001957 Chromosomal replication control, initiator DnaA 6 509 0.0
Pfam PF00308 Bacterial dnaA protein IPR013317 Chromosomal replication initiator protein DnaA 176 393 1.3E-100
FunFam G3DSA:1.10.1750.10:FF:000001 Chromosomal replication initiator protein DnaA - - 418 511 1.2E-54
Pfam PF11638 DnaA N-terminal domain IPR024633 DnaA N-terminal domain 4 63 2.1E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 128 162 -
Gene3D G3DSA:1.10.8.60 - - - 342 412 3.2E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.