Pseudomonas syringae pv. syringae B728a, Psyr_0628
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006520 | cellular amino acid metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR39329
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008851 | ethanolamine ammonia-lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR39329
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psb01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psb00564 | Glycerophospholipid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.20.20.70:FF:000055 | Ethanolamine ammonia-lyase heavy chain | - | - | 143 | 453 | 0.0 |
| Gene3D | G3DSA:2.30.170.30 | - | IPR044941 | Ethanolamine ammonia-lyase heavy chain, N-terminal domain | 3 | 55 | 1.0E-19 |
| PANTHER | PTHR39329 | ETHANOLAMINE AMMONIA-LYASE HEAVY CHAIN | IPR010628 | Ethanolamine ammonia-lyase heavy chain | 4 | 457 | 0.0 |
| FunFam | G3DSA:1.10.220.70:FF:000002 | Ethanolamine ammonia-lyase large subunit | - | - | 56 | 142 | 2.0E-51 |
| Hamap | MF_00861 | Ethanolamine ammonia-lyase large subunit [eutB]. | IPR010628 | Ethanolamine ammonia-lyase heavy chain | 3 | 457 | 56.382431 |
| Gene3D | G3DSA:1.10.220.70 | lyase | IPR044939 | Ethanolamine ammonia-lyase heavy chain, domain 2 | 56 | 142 | 3.1E-32 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | IPR013785 | Aldolase-type TIM barrel | 143 | 453 | 0.0 |
| Pfam | PF06751 | Ethanolamine ammonia lyase large subunit (EutB) | IPR010628 | Ethanolamine ammonia-lyase heavy chain | 13 | 442 | 0.0 |
| PIRSF | PIRSF018788 | EutB | IPR010628 | Ethanolamine ammonia-lyase heavy chain | 2 | 461 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.