Pseudomonas syringae pv. syringae B728a, Psyr_0660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR39168 | TRANSCRIPTIONAL REGULATOR-RELATED | - | - | 1 | 225 | 1.4E-70 |
| Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 6 | 98 | 3.4E-12 |
| CDD | cd00090 | HTH_ARSR | IPR011991 | ArsR-like helix-turn-helix domain | 13 | 86 | 1.71696E-9 |
| SMART | SM00418 | arsrmega2 | IPR001845 | HTH ArsR-type DNA-binding domain | 9 | 88 | 7.4E-12 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 7 | 86 | 1.12E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.