Pseudomonas syringae pv. syringae B728a, Psyr_0797

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 276 397 8.0E-30
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 67 79 5.7E-18
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 55 173 1.8E-34
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 386 405 5.7E-18
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 258 368 2.4E-27
Gene3D G3DSA:1.20.81.30 Type II secretion system (T2SS), domain F IPR042094 Type II secretion system GspF domain superfamily 57 173 3.7E-30
FunFam G3DSA:1.20.81.30:FF:000001 Type II secretion system protein F - - 258 375 3.2E-32
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 166 194 5.7E-18
Pfam PF00482 Type II secretion system (T2SS), protein F IPR018076 Type II secretion system protein GspF domain 71 194 1.0E-32
Coils Coil Coil - - 146 166 -
PRINTS PR00812 Bacterial general secretion pathway protein F signature IPR003004 GspF/PilC family 370 384 5.7E-18
PANTHER PTHR30012 GENERAL SECRETION PATHWAY PROTEIN IPR003004 GspF/PilC family 10 405 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.