Pseudomonas syringae pv. syringae B728a, Psyr_0798

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009297 pilus assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02538
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02538
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 188 455 5.4E-102
CDD cd01129 PulE-GspE-like - - 307 455 1.11379E-80
FunFam G3DSA:3.30.450.90:FF:000001 Type II secretion system ATPase GspE - - 157 287 2.7E-48
Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IPR007831 Type II secretion system protein GspE, N-terminal 42 147 6.9E-17
SUPERFAMILY SSF160246 EspE N-terminal domain-like IPR037257 Type II secretion system protein GspE, N-terminal superfamily 5 143 1.57E-35
PANTHER PTHR30258 TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED - - 24 563 1.7E-129
Gene3D G3DSA:3.30.450.90 - - - 160 287 4.2E-43
Gene3D G3DSA:3.30.300.160 - IPR037257 Type II secretion system protein GspE, N-terminal superfamily 63 143 9.8E-14
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 288 564 7.4E-105
NCBIfam TIGR02538 JCVI: type IV-A pilus assembly ATPase PilB IPR013374 ATPase, type IV, pilus assembly, PilB 8 564 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 173 562 7.99E-97
FunFam G3DSA:3.40.50.300:FF:000398 Type IV pilus assembly ATPase PilB - - 288 564 2.6E-120

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.