Pseudomonas syringae pv. syringae B728a, Psyr_0918

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03220 ABC_KpsT_Wzt IPR015860 ABC transporter, teichoic acids export TagH-like 4 226 2.92367E-101
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 32 233 1.7E-49
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 20 249 1.3E-49
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 258 397 2.3E-32
PANTHER PTHR46743 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 1 396 4.1E-118
Gene3D G3DSA:2.70.50.60 - - - 255 395 5.0E-31
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 49 229 9.1E-12
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 259 399 5.96185E-42
Coils Coil Coil - - 235 255 -
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 40 172 3.3E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.