Pseudomonas syringae pv. syringae B728a, Psyr_1125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 136 498 8.9E-65
Gene3D G3DSA:3.30.450.20 PAS domain - - 195 286 2.0E-17
SMART SM00267 duf1_3 IPR000160 GGDEF domain 325 498 2.0E-63
CDD cd12914 PDC1_DGC_like - - 71 194 9.54443E-20
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 331 499 6.9E-52
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 333 497 7.1E-49
Gene3D G3DSA:3.30.450.20 PAS domain - - 42 192 2.2E-26
CDD cd12915 PDC2_DGC_like - - 196 293 1.80605E-18
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 341 497 2.55E-48
CDD cd01949 GGDEF IPR000160 GGDEF domain 338 495 9.83537E-64
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 322 499 1.1E-56
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 336 494 3.2E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.