Pseudomonas syringae pv. syringae B728a, Psyr_2124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 25 299 2.0E-52
NCBIfam TIGR00895 JCVI: aromatic acid/H+ symport family MFS transporter IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family 14 413 0.0
CDD cd17365 MFS_PcaK_like - - 32 426 2.43626E-97
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 300 440 6.9E-10
PANTHER PTHR23508 CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG - - 15 436 1.0E-71
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 17 440 1.7E-77
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 36 406 3.5E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.