Pseudomonas syringae pv. syringae B728a, Psyr_2133

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_2133
Name
Replicon	chromosome
Genomic location	2493154 - 2494095 (+ strand)

Cross-References

RefSeq	YP_235214.1
GI	66045373
Entrez	3367647
INSDC	AAY37176.1
NCBI Locus Tag	Psyr_2133
UniParc	UPI000050D846
UniProtKB Acc	Q4ZUJ6
UniProtKB ID	Q4ZUJ6_PSEU2
UniRef100	UniRef100_Q4ZUJ6
UniRef50	UniRef50_D8IXT2
UniRef90	UniRef90_Q4ZUJ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	pseudouridine synthase
Synonyms
Evidence for Translation
Charge (pH 7)	1.55
Kyte-Doolittle Hydrophobicity Value	-0.280
Molecular Weight (kDa)	35627.4
Isoelectric Point (pI)	7.38

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 560 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003402 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_2133 Search term: pseudouridine synthase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000323288 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 3.2e-12 Percent Identity: 27.4
Ensembl 110, assembly GRCh38.p14	ENSP00000453036 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 3.2e-12 Percent Identity: 27.4

References