Pseudomonas syringae pv. syringae B728a, Psyr_2445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 663 673 2.4E-15
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 561 2.4E-15
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 557 7.39352E-13
Gene3D G3DSA:3.40.50.2300 - - - 898 1041 1.9E-18
Pfam PF13185 GAF domain IPR003018 GAF domain 253 388 5.3E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 680 698 2.4E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 782 888 3.8E-14
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 902 1016 9.5E-13
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 608 718 1.2E-26
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 550 723 7.07E-46
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 780 890 4.3E-16
SUPERFAMILY SSF55781 GAF domain-like - - 228 388 3.93E-24
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 608 720 1.3E-35
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 479 562 1.04E-20
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 493 561 1.1E-17
Gene3D G3DSA:3.40.50.2300 - - - 1047 1171 2.7E-43
Coils Coil Coil - - 389 490 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 704 717 2.4E-15
Gene3D G3DSA:3.40.50.2300 - - - 782 897 1.3E-22
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 613 717 8.1543E-49
Coils Coil Coil - - 883 903 -
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 560 722 1.8E-46
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 902 1032 8.25E-19
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 778 895 4.41E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 645 659 2.4E-15
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 45 179 2.5E-34
CDD cd00156 REC - - 905 996 3.89839E-14
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 229 399 2.1E-24
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1048 1162 7.2E-38
CDD cd00156 REC - - 783 880 1.49558E-15
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1050 1162 1.50664E-40
Gene3D G3DSA:1.10.287.130 - - - 458 559 2.6E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1050 1162 2.9E-27
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 904 1012 3.4E-14
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 560 723 1.9E-46
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1047 1167 6.4E-38
SMART SM00065 gaf_1 IPR003018 GAF domain 253 397 5.2E-15
CDD cd19410 HK9-like_sensor - - 49 171 6.60028E-34
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 119 960 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.