Pseudomonas syringae pv. syringae B728a, Psyr_2450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 414 537 1.2E-25
Coils Coil Coil - - 265 296 -
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 307 372 1.5E-8
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 294 371 2.16E-11
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 415 534 5.5E-18
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 303 369 6.68454E-9
Gene3D G3DSA:3.40.50.2300 - - - 19 149 2.3E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 164 274 1.15E-15
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 193 542 2.0E-73
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 305 373 1.7E-6
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 484 494 9.8E-14
Pfam PF08447 PAS fold IPR013655 PAS fold-3 173 258 3.0E-13
CDD cd00130 PAS IPR000014 PAS domain 203 262 8.0457E-4
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 374 544 7.9E-41
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 364 535 4.98E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 497 515 9.8E-14
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 560 670 6.9E-18
Gene3D G3DSA:2.10.70.100 - - - 221 267 3.5E-12
Gene3D G3DSA:3.30.450.20 PAS domain - - 150 216 2.2E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 466 480 9.8E-14
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 557 675 2.7E-27
CDD cd18161 REC_hyHK_blue-like - - 560 661 3.38917E-37
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 23 151 1.99E-9
Gene3D G3DSA:1.10.287.130 - - - 297 372 2.5E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 558 670 3.6E-23
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 521 534 9.8E-14
Gene3D G3DSA:3.40.50.2300 - - - 555 676 6.1E-26
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 203 272 4.9E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.