Pseudomonas syringae pv. syringae B728a, Psyr_2462

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01077
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01077
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psb00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc assimilatory sulfate reduction III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG psb01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55124 Nitrite/Sulfite reductase N-terminal domain-like IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily 252 421 6.54E-24
PANTHER PTHR32439 FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC - - 43 532 4.0E-91
Gene3D G3DSA:3.30.413.10 Sulfite Reductase Hemoprotein, domain 1 IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 408 552 1.0E-33
Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain 53 109 6.4E-16
Gene3D G3DSA:3.90.480.20 - - - 5 148 4.3E-32
Gene3D G3DSA:3.90.480.10 Sulfite Reductase Hemoprotein;Domain 2 - - 297 404 1.9E-8
SUPERFAMILY SSF55124 Nitrite/Sulfite reductase N-terminal domain-like IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily 1 126 1.31E-27
SUPERFAMILY SSF56014 Nitrite and sulphite reductase 4Fe-4S domain-like IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 409 548 1.2E-40
FunFam G3DSA:3.30.413.10:FF:000016 Sulfite reductase subunit beta - - 148 276 1.7E-71
Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain 329 397 9.9E-15
FunFam G3DSA:3.30.413.10:FF:000020 Sulfite reductase - - 408 552 6.6E-86
Gene3D G3DSA:3.30.413.10 Sulfite Reductase Hemoprotein, domain 1 IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 149 275 1.0E-31
SUPERFAMILY SSF56014 Nitrite and sulphite reductase 4Fe-4S domain-like IPR045854 Nitrite and sulphite reductase 4Fe-4S domain-like superfamily 120 283 1.96E-47
Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain IPR006067 Nitrite/sulphite reductase 4Fe-4S domain 119 272 3.9E-43
Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain IPR006067 Nitrite/sulphite reductase 4Fe-4S domain 452 547 4.8E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.