Pseudomonas syringae pv. syringae B728a, Psyr_2970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00028
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 38 | 364 | 7.6E-28 |
| PANTHER | PTHR44227 | - | - | - | 176 | 361 | 3.4E-14 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 256 | 289 | 290.0 |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 171 | 221 | 1.1E-6 |
| SUPERFAMILY | SSF48371 | ARM repeat | IPR016024 | Armadillo-type fold | 62 | 201 | 9.6E-6 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 156 | 355 | 4.65E-22 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 290 | 323 | 130.0 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 188 | 221 | 0.1 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.