Pseudomonas syringae pv. syringae B728a, Psyr_3845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00337
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psb02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 31 351 3.0E-123
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 30 46 1.5E-51
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 281 294 1.5E-51
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 71 89 1.5E-51
Pfam PF13458 Periplasmic binding protein IPR028081 Leucine-binding protein domain 29 364 1.5E-66
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 333 348 1.5E-51
Gene3D G3DSA:3.40.50.2300 - - - 148 276 3.0E-123
PANTHER PTHR47151 LEU/ILE/VAL-BINDING ABC TRANSPORTER SUBUNIT - - 8 364 4.8E-123
CDD cd06342 PBP1_ABC_LIVBP-like - - 31 363 0.0
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 92 102 1.5E-51
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 52 68 1.5E-51
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 28 368 6.18E-98
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 258 276 1.5E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.