Pseudomonas syringae pv. syringae B728a, Psyr_4961

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 19 218 2.0E-52
TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family IPR017732 Type IV / VI secretion system, DotU 18 223 6.1E-60
Gene3D G3DSA:1.25.40.590 IPR038522 Type IV / VI secretion system, DotU superfamily 14 181 2.0E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.