Pseudomonas aeruginosa UCBPP-PA14, PA14_05880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.226.10 - - - 20 247 3.2E-61
CDD cd07020 Clp_protease_NfeD_1 - - 27 221 5.7176E-96
Pfam PF01957 NfeD-like C-terminal, partner-binding IPR002810 NfeD-like, C-terminal domain 353 435 3.5E-10
FunFam G3DSA:3.90.226.10:FF:000089 Membrane-bound serine protease - - 21 248 3.1E-100
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 374 441 1.0E-8
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 25 194 3.67E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 128 147 -
PANTHER PTHR33507 INNER MEMBRANE PROTEIN YBBJ - - 4 438 3.5E-111
SUPERFAMILY SSF141322 NfeD domain-like - - 370 436 9.29E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.