Pseudomonas aeruginosa UCBPP-PA14, PA14_61200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.160.710 - - - 796 886 4.7E-7
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1477 1552 2.3E-20
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 912 985 7.1E-20
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 992 1067 1.7E-19
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1154 1229 3.1E-20
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1235 1310 1.1E-20
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 40 152 1.2E-35
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 824 906 7.4E-12
Gene3D G3DSA:3.30.160.710 - - - 893 954 3.4E-5
Gene3D G3DSA:3.30.160.710 - - - 1616 1694 2.2E-5
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 42 426 4.9E-89
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1800 1873 3.9E-16
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1073 1148 1.1E-20
FunFam G3DSA:2.160.20.10:FF:000109 Hemagglutination activity domain protein - - 42 437 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1639 1714 2.3E-20
Gene3D G3DSA:3.30.160.710 - - - 1131 1209 8.8E-6
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1558 1633 1.3E-20
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 74 149 2.1E-18
Gene3D G3DSA:3.30.160.710 - - - 1212 1283 2.5E-5
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1316 1391 8.2E-21
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1397 1471 2.9E-19
PANTHER PTHR12338 AUTOTRANSPORTER - - 2 983 0.0
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 63 336 1.35E-43
Gene3D G3DSA:3.30.160.710 - - - 1374 1439 5.1E-5
Gene3D G3DSA:3.30.160.710 - - - 1050 1121 7.6E-6
Gene3D G3DSA:3.30.160.710 - - - 1535 1607 7.4E-6
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 40 303 5.5E-44
Gene3D G3DSA:3.30.160.710 - - - 1293 1364 5.2E-6
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1720 1794 1.8E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.