Pseudomonas aeruginosa UCBPP-PA14, PA14_66320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 471 641 2.1E-51
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 471 624 1.1E-39
SMART SM00086 pac_2 IPR001610 PAC motif 418 460 8.1E-7
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 644 892 8.11E-92
Pfam PF13426 PAS domain IPR000014 PAS domain 358 459 1.4E-14
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 640 894 1.9E-101
CDD cd01949 GGDEF IPR000160 GGDEF domain 472 627 5.81489E-55
SMART SM00267 duf1_3 IPR000160 GGDEF domain 460 629 1.2E-56
SMART SM00091 pas_2 IPR000014 PAS domain 24 87 59.0
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 642 894 1.2E-103
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 476 630 1.1E-43
SMART SM00052 duf2_2 IPR001633 EAL domain 639 885 2.7E-123
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 346 466 3.9E-17
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 135 885 0.0
SMART SM00065 gaf_1 IPR003018 GAF domain 192 343 5.2E-9
Pfam PF01590 GAF domain IPR003018 GAF domain 193 332 8.0E-13
CDD cd00130 PAS IPR000014 PAS domain 355 457 4.42189E-11
Gene3D G3DSA:3.30.450.20 PAS domain - - 345 470 2.4E-28
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 352 458 3.22E-22
CDD cd01948 EAL IPR001633 EAL domain 645 884 2.79868E-103
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 166 342 3.9E-18
Pfam PF00563 EAL domain IPR001633 EAL domain 646 880 6.6E-78
SMART SM00091 pas_2 IPR000014 PAS domain 346 412 3.8E-6
SUPERFAMILY SSF55781 GAF domain-like - - 195 335 3.05E-19
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 467 628 1.9E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.