Pseudomonas aeruginosa PA7, PSPA7_0328

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30328 TRANSCRIPTIONAL REPRESSOR - - 13 221 2.9E-76
MobiDBLite mobidb-lite consensus disorder prediction - - 1 26 -
SUPERFAMILY SSF48498 Tetracyclin repressor-like, C-terminal domain IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 96 221 4.36E-35
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 51 74 1.3E-6
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 17 97 9.75E-19
Gene3D G3DSA:1.10.357.10 Tetracycline Repressor, domain 2 - - 26 222 3.0E-61
Pfam PF17938 Tetracyclin repressor-like, C-terminal domain IPR041474 HTH-type transcriptional repressor NicS, C-terminal 98 216 1.5E-44
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 30 43 1.3E-6
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 30 76 3.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.