Pseudomonas aeruginosa PA7, PSPA7_0610 (nirN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0610
Name
nirN
Replicon chromosome
Genomic location 630333 - 631814 (- strand)

Cross-References

RefSeq YP_001346005.1
GI 152985206
Entrez 5355856
INSDC ABR82389.1
NCBI Locus Tag PSPA7_0610
UniParc UPI0000D73428
UniProtKB Acc A6UYX0
UniProtKB ID A6UYX0_PSEA7
UniRef100 UniRef100_A6UYX0
UniRef50 UniRef50_F8GTF5
UniRef90 UniRef90_A6UYX0

Product

Feature Type CDS
Coding Frame 1
Product Name
putative c-type cytochrome
Synonyms
Evidence for Translation
Charge (pH 7) 4.03
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 53985.8
Isoelectric Point (pI) 7.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6RTE OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE Pseudomonas aeruginosa 1.94 X-RAY DIFFRACTION 95.2
6RTD OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE Pseudomonas aeruginosa 2.36 X-RAY DIFFRACTION 95.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0610
Search term: nirN

Human Homologs

References

No references are associated with this feature.