Pseudomonas aeruginosa PA7, PSPA7_4370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00346
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.40 IPR029016 GAF-like domain superfamily 114 282 1.1E-23
SUPERFAMILY SSF55781 98 281 2.16E-25
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 36 107 6.1E-14
ProSiteProfiles PS51077 IclR-type HTH domain profile. IPR005471 Transcription regulator IclR, N-terminal 40 102 13.967
ProSiteProfiles PS51078 IclR effector binding domain profile. IPR014757 Transcription regulator IclR, C-terminal 103 282 17.141
Pfam PF01614 Bacterial transcriptional regulator IPR014757 Transcription regulator IclR, C-terminal 159 278 1.6E-9
MobiDBLite mobidb-lite consensus disorder prediction 16 38 -
SMART SM00346 IPR005471 Transcription regulator IclR, N-terminal 40 129 3.8E-12
Pfam PF09339 IclR helix-turn-helix domain IPR005471 Transcription regulator IclR, N-terminal 42 92 1.5E-12
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 40 111 2.23E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.