Pseudomonas aeruginosa PA7, PSPA7_4380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00033
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 12 70 1.25E-16
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 29 40 1.7E-13
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 13 29 1.7E-13
SUPERFAMILY SSF54909 Dimeric alpha+beta barrel IPR011008 Dimeric alpha-beta barrel 76 155 1.61E-16
Pfam PF01037 Lrp/AsnC ligand binding domain IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain 79 152 4.8E-17
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 14 63 2.0E-19
SMART SM00344 asnc IPR019888 Transcription regulator AsnC-like 13 122 6.8E-34
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 14 64 1.54321E-8
PANTHER PTHR30154 LEUCINE-RESPONSIVE REGULATORY PROTEIN - - 10 158 3.7E-31
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 40 59 1.7E-13
Gene3D G3DSA:3.30.70.920 - - - 64 157 5.1E-18
Pfam PF13412 Winged helix-turn-helix DNA-binding - - 13 60 3.5E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.