Pseudomonas aeruginosa PA7, PSPA7_4621 (argR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1900081 regulation of arginine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0893
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9286981
Biological Process GO:1900079 regulation of arginine biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0893
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9286981
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00032
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00032
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PA7 genes in this class
Amino acid biosynthesis and metabolism Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03136 GATase1_AraC_ArgR_like - - 8 189 6.12741E-50
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 233 311 1.4E-23
FunFam G3DSA:1.10.10.60:FF:000090 Transcriptional regulator ArgR, AraC family - - 207 312 2.2E-57
FunFam G3DSA:3.40.50.880:FF:000074 Transcriptional regulator ArgR - - 2 200 1.0E-126
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 2 200 4.3E-32
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 210 261 1.43E-8
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 294 310 4.8E-5
MobiDBLite mobidb-lite consensus disorder prediction - - 307 329 -
Gene3D G3DSA:1.10.10.60 - - - 207 315 7.1E-31
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 5 192 2.87E-24
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 263 314 1.25E-12
PANTHER PTHR43280 ARAC-FAMILY TRANSCRIPTIONAL REGULATOR - - 164 314 3.7E-29
SMART SM00342 aracneu4 IPR018060 DNA binding HTH domain, AraC-type 227 310 1.3E-33
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 279 294 4.8E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.