Pseudomonas aeruginosa PA7, PSPA7_6242

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005976 polysaccharide metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000271 polysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pap02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pap00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.120.10 IPR014710 RmlC-like jelly roll fold 356 466 3.1E-16
Pfam PF01050 Mannose-6-phosphate isomerase IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal 323 473 4.6E-68
SUPERFAMILY SSF51182 IPR011051 RmlC-like cupin domain superfamily 189 477 6.53E-78
CDD cd02509 GDP-M1P_Guanylyltransferase 2 285 1.71543E-122
SUPERFAMILY SSF53448 IPR029044 Nucleotide-diphospho-sugar transferases 2 286 1.03E-65
Gene3D G3DSA:3.90.550.10 IPR029044 Nucleotide-diphospho-sugar transferases 2 355 1.1E-113
Pfam PF00483 Nucleotidyl transferase IPR005835 Nucleotidyl transferase domain 4 288 3.6E-54
TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.