Pseudomonas aeruginosa M18, PAM18_0021

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009294 DNA mediated transformation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02481
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other M18 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43022 PROTEIN SMF IPR003488 DNA recombination-mediator protein A 5 360 3.1E-97
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 293 359 6.8E-9
Pfam PF02481 DNA recombination-mediator protein A IPR003488 DNA recombination-mediator protein A 81 283 2.0E-74
Gene3D G3DSA:3.40.50.450 - - - 1 292 5.6E-105
Pfam PF17782 DprA winged helix domain IPR041614 DprA, winged helix domain 297 355 7.0E-9
SUPERFAMILY SSF102405 MCP/YpsA-like - - 85 293 3.97E-45
NCBIfam TIGR00732 JCVI: DNA-processing protein DprA IPR003488 DNA recombination-mediator protein A 74 291 2.8E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.