Pseudomonas aeruginosa M18, PAM18_0078

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other M18 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1730.10 pa0076 domain IPR038225 T6S-associated protein TagF superfamily 1 226 1.2E-86
PIRSF PIRSF029287 UCP029287 IPR017748 T6S-associated protein TagF 1 219 1.0E-98
NCBIfam TIGR03373 JCVI: type VI secretion system-associated protein TagF IPR017748 T6S-associated protein TagF 5 139 2.0E-48
Pfam PF09867 TagF N-terminal domain, Type VI secretion system-associated IPR017748 T6S-associated protein TagF 5 139 6.3E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.