Pseudomonas aeruginosa M18, PAM18_0237

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 234 439 1.7E-15
CDD cd17319 MFS_ExuT_GudP_like - - 33 433 5.23124E-91
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 25 437 2.49E-73
PANTHER PTHR11662 SOLUTE CARRIER FAMILY 17 - - 31 433 1.3E-59
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 40 396 2.6E-51
FunFam G3DSA:1.20.1250.20:FF:000036 Hexuronate transporter - - 26 223 1.4E-82
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 28 222 4.7E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.