Pseudomonas aeruginosa M18, PAM18_0443
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001235
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016787 | hydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01546
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | paf00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | paf01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07687 | Peptidase dimerisation domain | IPR011650 | Peptidase M20, dimerisation domain | 220 | 321 | 2.3E-5 |
| SUPERFAMILY | SSF55031 | Bacterial exopeptidase dimerisation domain | IPR036264 | Bacterial exopeptidase dimerisation domain | 221 | 336 | 1.44E-29 |
| PANTHER | PTHR32494 | ALLANTOATE DEIMINASE-RELATED | IPR010158 | Amidase, carbamoylase-type | 9 | 417 | 5.2E-130 |
| Gene3D | G3DSA:3.40.630.10 | Zn peptidases | - | - | 23 | 410 | 0.0 |
| Gene3D | G3DSA:3.30.70.360 | - | - | - | 221 | 335 | 0.0 |
| PIRSF | PIRSF001235 | Amidase_hyd_carb | IPR010158 | Amidase, carbamoylase-type | 12 | 421 | 0.0 |
| Pfam | PF01546 | Peptidase family M20/M25/M40 | IPR002933 | Peptidase M20 | 88 | 414 | 9.2E-39 |
| NCBIfam | TIGR01879 | JCVI: hydantoinase/carbamoylase family amidase | IPR010158 | Amidase, carbamoylase-type | 18 | 415 | 0.0 |
| SUPERFAMILY | SSF53187 | Zn-dependent exopeptidases | - | - | 6 | 415 | 1.59E-99 |
| CDD | cd03884 | M20_bAS | - | - | 20 | 414 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.