Pseudomonas aeruginosa M18, PAM18_0508 (nirN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR47197 PROTEIN NIRF - - 131 484 6.1E-29
Pfam PF02239 Cytochrome D1 heme domain - - 129 484 0.0
SUPERFAMILY SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily 102 485 5.62E-90
FunFam G3DSA:2.140.10.20:FF:000002 Probable c-type cytochrome - - 100 486 0.0
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 13 98 6.1E-17
Gene3D G3DSA:2.140.10.20 - IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily 100 486 8.5E-115
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 21 92 1.4E-13
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 9 111 7.9E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.