Pseudomonas aeruginosa M18, PAM18_4218
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.260.40 | - | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | 19 | 98 | 2.5E-7 |
| CDD | cd00093 | HTH_XRE | IPR001387 | Cro/C1-type helix-turn-helix domain | 33 | 63 | 5.89522E-4 |
| Pfam | PF13744 | Helix-turn-helix domain | IPR039554 | HigA2-like, helix-turn-helix domain | 12 | 86 | 2.8E-14 |
| SUPERFAMILY | SSF47413 | lambda repressor-like DNA-binding domains | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | 31 | 95 | 2.73E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.