Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006298 | mismatch repair |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5443
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
11952911 | |
Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01075
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006268 | DNA unwinding involved in DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01075
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00580
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003678 | DNA helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01075
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016787 | hydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | paf03430 | Mismatch repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | paf03420 | Nucleotide excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.160 | - | IPR013986 | DExx box DNA helicase domain superfamily | 116 | 189 | 1.1E-102 |
Pfam | PF13361 | UvrD-like helicase C-terminal domain | IPR014017 | UvrD-like DNA helicase, C-terminal | 279 | 618 | 2.3E-78 |
Gene3D | G3DSA:1.10.486.10 | PCRA; domain 4 | - | - | 384 | 540 | 0.0 |
FunFam | G3DSA:3.40.50.300:FF:001201 | ATP-dependent DNA helicase UvrD2 | - | - | 282 | 385 | 7.0E-34 |
SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 9 | 644 | 0.0 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 283 | 638 | 0.0 |
FunFam | G3DSA:1.10.10.160:FF:000002 | DNA helicase | - | - | 116 | 189 | 2.2E-28 |
PANTHER | PTHR11070 | UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER | IPR000212 | DNA helicase, UvrD/REP type | 10 | 647 | 0.0 |
FunFam | G3DSA:1.10.486.10:FF:000001 | DNA helicase | - | - | 384 | 540 | 1.1E-73 |
Pfam | PF00580 | UvrD/REP helicase N-terminal domain | IPR014016 | UvrD-like helicase, ATP-binding domain | 12 | 273 | 6.8E-74 |
NCBIfam | TIGR01075 | JCVI: DNA helicase UvrD | IPR005753 | DNA helicase, ATP-dependent, UvrD type | 8 | 726 | 0.0 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 12 | 275 | 1.1E-102 |
CDD | cd17932 | DEXQc_UvrD | - | - | 16 | 285 | 5.12281E-89 |
CDD | cd18807 | SF1_C_UvrD | - | - | 287 | 616 | 6.05832E-31 |