Pseudomonas aeruginosa DK2, PADK2_00475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdk03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05954 Phage tail baseplate hub (GPD) - - 29 329 1.3E-104
PANTHER PTHR32305 - - - 26 620 7.2E-91
Gene3D G3DSA:3.55.50.10 - - - 98 189 0.0
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 5.3E-15
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 98 189 2.1E-44
Gene3D G3DSA:4.10.220.110 - - - 224 286 0.0
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 355 457 5.0E-46
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 355 457 7.5E-62
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 365 452 1.12E-35
FunFam G3DSA:4.10.220.110:FF:000001 VgrG1 - - 224 286 1.1E-33
SUPERFAMILY SSF69279 Phage tail proteins - - 11 184 1.28E-62
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 516 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 190 363 4.25E-36
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 619 3.77E-42
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 23 499 0.0
Gene3D G3DSA:2.30.110.50 - - - 15 333 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.