Pseudomonas aeruginosa DK2, PADK2_07240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 266 346 4.71E-5
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 422 442 1.2E-65
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 35 399 8.7E-19
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 340 364 1.2E-65
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 407 422 1.2E-65
Gene3D G3DSA:2.40.30.170 - - - 305 425 2.5E-6
NCBIfam TIGR01843 JCVI: HlyD family type I secretion periplasmic adaptor subunit IPR010129 Type I secretion membrane fusion protein, HlyD family 22 443 0.0
Gene3D G3DSA:1.10.287.1490 - - - 146 297 1.8E-5
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 20 437 3.1E-75
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 364 387 1.2E-65
Coils Coil Coil - - 174 208 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 75 95 1.2E-65
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 307 328 1.2E-65
Gene3D G3DSA:2.40.50.100 - - - 67 126 8.3E-8
Coils Coil Coil - - 262 296 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 33 56 1.2E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.