Pseudomonas aeruginosa DK2, PADK2_20440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004733 pyridoxamine-phosphate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00558
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other DK2 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01243 Pyridoxamine 5'-phosphate oxidase IPR011576 Pyridoxamine 5'-phosphate oxidase, putative 43 122 1.5E-29
PANTHER PTHR10851 PYRIDOXINE-5-PHOSPHATE OXIDASE IPR000659 Pyridoxamine 5'-phosphate oxidase 5 215 1.9E-75
SUPERFAMILY SSF50475 FMN-binding split barrel - - 8 215 1.23E-71
PIRSF PIRSF000190 Pyd_amn-ph_oxd IPR000659 Pyridoxamine 5'-phosphate oxidase 1 215 8.5E-83
Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. IPR000659 Pyridoxamine 5'-phosphate oxidase 11 215 40.359497
NCBIfam TIGR00558 JCVI: pyridoxamine 5'-phosphate oxidase IPR000659 Pyridoxamine 5'-phosphate oxidase 25 215 1.4E-81
Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal 175 215 1.6E-20
FunFam G3DSA:2.30.110.10:FF:000011 Chromosome 7, whole genome shotgun sequence - - 14 215 3.4E-103
Gene3D G3DSA:2.30.110.10 - IPR012349 FMN-binding split barrel 2 215 7.1E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.