Pseudomonas aeruginosa B136-33, G655_00490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psg03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05954 | Phage tail baseplate hub (GPD) | - | - | 29 | 329 | 3.9E-106 |
| Pfam | PF06715 | Gp5 C-terminal repeat (3 copies) | IPR010609 | Gp5, C-terminal | 529 | 552 | 2.7E-5 |
| NCBIfam | TIGR03361 | JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 11 | 524 | 0.0 |
| FunFam | G3DSA:4.10.220.110:FF:000001 | VgrG1 | - | - | 224 | 286 | 4.7E-31 |
| SUPERFAMILY | SSF69279 | Phage tail proteins | - | - | 189 | 363 | 5.1E-37 |
| SUPERFAMILY | SSF69349 | Phage fibre proteins | - | - | 580 | 723 | 8.63E-24 |
| FunFam | G3DSA:2.40.50.230:FF:000001 | Type VI secretion protein VgrG | - | - | 355 | 457 | 1.4E-61 |
| PANTHER | PTHR32305 | - | - | - | 15 | 662 | 2.1E-97 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 465 | 483 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 465 | 485 | - |
| Gene3D | G3DSA:4.10.220.110 | - | - | - | 224 | 286 | 0.0 |
| SUPERFAMILY | SSF69349 | Phage fibre proteins | - | - | 442 | 608 | 2.04E-48 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 614 | 669 | - |
| NCBIfam | TIGR01646 | JCVI: type VI secretion system tip protein VgrG | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 22 | 506 | 0.0 |
| Pfam | PF06715 | Gp5 C-terminal repeat (3 copies) | IPR010609 | Gp5, C-terminal | 633 | 656 | 6.1E-5 |
| SUPERFAMILY | SSF69255 | gp5 N-terminal domain-like | - | - | 365 | 452 | 3.92E-35 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 614 | 678 | - |
| SUPERFAMILY | SSF69279 | Phage tail proteins | - | - | 11 | 184 | 7.65E-64 |
| Gene3D | G3DSA:3.55.50.10 | - | - | - | 98 | 189 | 0.0 |
| FunFam | G3DSA:3.55.50.10:FF:000001 | Actin cross-linking toxin VgrG1 | - | - | 98 | 189 | 1.8E-44 |
| Gene3D | G3DSA:2.30.110.50 | - | - | - | 15 | 333 | 0.0 |
| Gene3D | G3DSA:2.40.50.230 | - | IPR037026 | Vgr protein, OB-fold domain superfamily | 355 | 457 | 1.3E-45 |
| Pfam | PF04717 | Type VI secretion system/phage-baseplate injector OB domain | IPR006531 | Gp5/Type VI secretion system Vgr protein, OB-fold domain | 386 | 453 | 1.6E-14 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.