Pseudomonas aeruginosa B136-33, G655_02165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg01501 beta-Lactam resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.30.170 - - - 50 262 2.8E-64
FunFam G3DSA:2.40.420.20:FF:000001 Efflux RND transporter periplasmic adaptor subunit - - 263 355 1.9E-31
FunFam G3DSA:2.40.30.170:FF:000001 Multidrug resistance efflux transporter MdtE - - 182 263 8.0E-38
PANTHER PTHR30158 ACRA/E-RELATED COMPONENT OF DRUG EFFLUX TRANSPORTER - - 7 367 6.6E-124
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 43 279 3.66E-94
NCBIfam TIGR01730 JCVI: efflux RND transporter periplasmic adaptor subunit IPR006143 RND efflux pump, membrane fusion protein 32 354 1.5E-76
Gene3D G3DSA:2.40.50.100 - - - 56 186 2.8E-64
Coils Coil Coil - - 97 117 -
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 273 340 1.8E-8
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 53 272 6.5E-16
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 91 150 2.8E-64
Gene3D G3DSA:2.40.420.20 - - - 263 356 5.2E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.