Pseudomonas aeruginosa B136-33, G655_02235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01180
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01180
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other B136-33 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.20.20.70:FF:000027 Dihydropyrimidine dehydrogenase [NADP(+)] - - 4 311 8.0E-118
NCBIfam TIGR01037 JCVI: dihydroorotate dehydrogenase family protein IPR005720 Dihydroorotate dehydrogenase domain 4 319 5.2E-49
Pfam PF01180 Dihydroorotate dehydrogenase IPR005720 Dihydroorotate dehydrogenase domain 4 305 1.2E-26
PANTHER PTHR43073 DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] - - 306 407 0.0
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 1 319 1.23E-75
Pfam PF14697 4Fe-4S dicluster domain - - 338 400 4.5E-22
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 4 310 1.9E-95
CDD cd02940 DHPD_FMN - - 3 301 0.0
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 317 401 3.52E-13
FunFam G3DSA:3.30.70.20:FF:000087 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA - - 308 411 7.3E-66
Gene3D G3DSA:3.30.70.20 - - - 316 414 1.8E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.