Pseudomonas aeruginosa B136-33, G655_02505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50975
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00867
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other B136-33 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg00061 Fatty acid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 156 170 -
Pfam PF02785 Biotin carboxylase C-terminal domain IPR005482 Biotin carboxylase, C-terminal 339 445 6.4E-39
SUPERFAMILY SSF52440 IPR016185 Pre-ATP-grasp domain superfamily 3 116 6.83E-44
SMART SM00878 IPR005482 Biotin carboxylase, C-terminal 339 445 7.1E-60
Gene3D G3DSA:3.30.470.130 1 450 0.0
SUPERFAMILY SSF56059 86 351 4.07E-68
SUPERFAMILY SSF51246 IPR011054 Rudiment single hybrid motif 334 449 1.46E-39
ProSiteProfiles PS50975 ATP-grasp fold profile. IPR011761 ATP-grasp fold 123 320 49.741
ProSiteProfiles PS50979 Biotin carboxylation domain profile. IPR011764 Biotin carboxylation domain 4 449 52.761
Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 118 325 1.3E-73
ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 289 296 -
Pfam PF00289 Biotin carboxylase, N-terminal domain IPR005481 Biotin carboxylase-like, N-terminal domain 5 113 1.3E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.