Pseudomonas aeruginosa B136-33, G655_07695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.287.1490 - - - 146 297 1.8E-5
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 20 437 8.5E-75
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 75 95 8.5E-65
Coils Coil Coil - - 262 296 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 364 387 8.5E-65
Coils Coil Coil - - 174 208 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 33 56 8.5E-65
Gene3D G3DSA:2.40.50.100 - - - 67 126 8.3E-8
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 35 399 7.1E-18
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 266 346 4.58E-5
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 407 422 8.5E-65
Gene3D G3DSA:2.40.30.170 - - - 306 425 3.9E-6
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 422 442 8.5E-65
NCBIfam TIGR01843 JCVI: HlyD family type I secretion periplasmic adaptor subunit IPR010129 Type I secretion membrane fusion protein, HlyD family 22 443 0.0
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 307 328 8.5E-65
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 340 364 8.5E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.