Pseudomonas aeruginosa B136-33, G655_18100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psg02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 20 141 1.4E-15
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 250 435 1.14E-56
Pfam PF08447 PAS fold IPR013655 PAS fold-3 165 250 6.1E-15
FunFam G3DSA:3.30.450.20:FF:000103 Methyl-accepting chemotaxis protein - - 142 256 2.5E-59
SMART SM00091 pas_2 IPR000014 PAS domain 140 209 9.5
FunFam G3DSA:3.30.450.20:FF:000103 Methyl-accepting chemotaxis protein - - 20 134 2.1E-52
Gene3D G3DSA:1.10.287.950 - - - 251 438 4.6E-52
SMART SM00086 pac_2 IPR001610 PAC motif 215 257 2.3E-6
SMART SM00086 pac_2 IPR001610 PAC motif 93 135 0.049
CDD cd11386 MCP_signal - - 265 437 4.14033E-54
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 436 3.7E-41
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 152 254 6.46E-25
CDD cd00130 PAS IPR000014 PAS domain 37 132 4.96459E-13
PANTHER PTHR32089 METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB - - 265 434 2.8E-57
Pfam PF13426 PAS domain IPR000014 PAS domain 37 132 1.7E-15
SMART SM00091 pas_2 IPR000014 PAS domain 20 88 1.3E-4
Gene3D G3DSA:3.30.450.20 PAS domain - - 127 250 2.1E-21
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 153 260 1.2E-14
Gene3D G3DSA:3.30.450.20 PAS domain - - 4 126 8.4E-24
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 30 132 5.31E-26
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 246 440 1.7E-24
CDD cd00130 PAS IPR000014 PAS domain 152 254 7.02596E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.