Pseudomonas aeruginosa B136-33, G655_28590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 1 36 7.0E-9
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 61 8.8E-12
Gene3D G3DSA:3.40.190.290 - - - 67 272 2.1E-41
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 61 265 5.1E-53
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 1 61 1.09E-9
CDD cd08419 PBP2_CbbR_RubisCO_like - - 66 262 2.86395E-99
PANTHER PTHR30126 HTH-TYPE TRANSCRIPTIONAL REGULATOR - - 1 267 9.4E-65
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 63 266 1.96E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.