Pseudomonas aeruginosa B136-33, G655_28625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 702 949 7.72E-92
Pfam PF13426 PAS domain IPR000014 PAS domain 412 513 6.6E-16
SMART SM00267 duf1_3 IPR000160 GGDEF domain 515 687 5.0E-52
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 698 951 3.0E-102
SMART SM00086 pac_2 IPR001610 PAC motif 350 393 1.0E-6
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 324 399 1.8E-7
Coils Coil Coil - - 691 711 -
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 392 512 4.54E-24
SMART SM00086 pac_2 IPR001610 PAC motif 473 515 0.0021
CDD cd01948 EAL IPR001633 EAL domain 703 942 1.69052E-103
SMART SM00091 pas_2 IPR000014 PAS domain 277 343 40.0
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 533 696 1.7E-50
Pfam PF08447 PAS fold IPR013655 PAS fold-3 317 386 5.3E-17
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 527 685 3.4E-32
Gene3D G3DSA:3.30.450.20 PAS domain - - 396 532 2.9E-32
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 378 944 0.0
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 398 522 2.2E-19
CDD cd01949 GGDEF IPR000160 GGDEF domain 527 685 5.34527E-54
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 320 395 3.14E-14
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 531 689 1.18E-42
SMART SM00091 pas_2 IPR000014 PAS domain 401 467 2.6E-8
CDD cd00130 PAS IPR000014 PAS domain 320 390 1.13985E-5
Gene3D G3DSA:3.30.450.20 PAS domain - - 269 389 3.5E-29
CDD cd00130 PAS IPR000014 PAS domain 410 512 1.99265E-11
Pfam PF00563 EAL domain IPR001633 EAL domain 704 937 3.2E-73
SMART SM00052 duf2_2 IPR001633 EAL domain 697 942 9.3E-119
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 527 682 1.9E-41
Coils Coil Coil - - 212 264 -
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 698 951 2.0E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.