Pseudomonas aeruginosa RP73, M062_02145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042910 xenobiotic transmembrane transporter activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0427
 ECO:0000249
sequence similarity evidence used in automatic assertion		 8540696
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other RP73 genes in this class
Antibiotic resistance and susceptibility Other RP73 genes in this class
Membrane proteins Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG prp01501 beta-Lactam resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 284 464 4.5E-27
Coils Coil Coil - - 223 243 -
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 1 468 1.26E-120
Gene3D G3DSA:2.20.200.10 Outer membrane efflux proteins (OEP) - - 103 355 0.0
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 66 256 8.4E-28
PANTHER PTHR30203 OUTER MEMBRANE CATION EFFLUX PROTEIN - - 4 478 9.0E-112
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 57 466 0.0
NCBIfam TIGR01845 JCVI: efflux transporter outer membrane subunit IPR010131 RND efflux system, outer membrane lipoprotein, NodT 9 466 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.