Pseudomonas aeruginosa RP73, M062_02315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 118 224 7.4E-24
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 112 4.1E-24
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 1 222 2.1E-51
Gene3D G3DSA:3.40.50.2300 - - - 1 80 1.5E-18
CDD cd17574 REC_OmpR - - 5 102 6.20919E-47
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 149 223 2.3E-20
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 135 222 8.79112E-23
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 133 224 4.54E-21
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 124 5.27E-37
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 148 224 4.4E-18
Gene3D G3DSA:6.10.250.690 - - - 81 117 7.5E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2 112 5.1E-39
FunFam G3DSA:3.40.50.2300:FF:000021 Two-component system response regulator KdpE - - 1 80 1.1E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.