Pseudomonas aeruginosa RP73, M062_02505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009102 biotin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01693
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1150.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016740 transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00599
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008710 8-amino-7-oxononanoate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01693
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc 8-amino-7-oxononanoate biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00780 Biotin metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 8-amino-7-oxononanoate biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG prp00780 Biotin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 8-amino-7-oxononanoate biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG prp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site 233 242 -
Pfam PF00155 Aminotransferase class I and II IPR004839 Aminotransferase, class I/classII 39 378 3.6E-52
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 6 385 1.16E-109
Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria 1 382 51.29
CDD cd06454 KBL_like 37 382 2.58294E-162
TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type 17 378 0.0
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 55 284 2.6E-129
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 39 376 2.6E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.