Pseudomonas aeruginosa RP73, M062_08765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other RP73 genes in this class
Chemotaxis Other RP73 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG prp02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG prp02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 618 7.9E-45
PANTHER PTHR32089 METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB - - 24 651 3.0E-114
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 343 652 5.23E-79
SMART SM00304 HAMP_11 IPR003660 HAMP domain 323 375 1.4E-12
CDD cd06225 HAMP - - 326 370 2.33365E-10
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 390 651 2.3E-84
CDD cd11386 MCP_signal - - 417 616 1.38734E-47
SMART SM01358 HBM_sequencesselection_2 IPR032255 Helical bimodular sensor domain 37 301 2.7E-38
Coils Coil Coil - - 79 99 -
SMART SM00304 HAMP_11 IPR003660 HAMP domain 376 428 22.0
Coils Coil Coil - - 191 211 -
Coils Coil Coil - - 580 607 -
Pfam PF00672 HAMP domain IPR003660 HAMP domain 322 371 3.5E-12
Coils Coil Coil - - 458 478 -
Gene3D G3DSA:1.10.287.950 - - - 323 652 1.9E-80
Gene3D G3DSA:1.20.1440.210 - - - 27 126 3.1E-5
FunFam G3DSA:1.10.287.950:FF:000001 Methyl-accepting chemotaxis sensory transducer - - 323 652 3.0E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.